Available plugins
| Name | Short Description |
|---|---|
annotate | QIIME 2 plugin for metagenome analysis. |
assembly | QIIME 2 plugin for (meta)genome assembly. |
cutadapt | Plugin for removing adapter sequences, primers, and other unwanted sequence from sequence data. |
demux | Plugin for demultiplexing & viewing sequence quality. |
fastp | |
feature-table | Plugin for working with sample by feature tables. |
fondue | Plugin for fetching sequences and metadata. |
metadata | Plugin for working with Metadata. |
quality-control | Plugin for quality control of feature and sequence data. |
rescript | Pipeline for reference sequence annotation and curation. |
sapienns | Plugin for interacting with biobakery data. |
sourmash | Plugin for generation of MinHash signatures. |
taxa | Plugin for working with feature taxonomy annotations. |
types | Plugin defining types for microbiome analysis. |
vizard | Generalized microbiome data visualization. |